GAP Home USGS Home

| GAP home | USGS home |

Volume No. 12, 2003/2004

AQUATIC GAP

Surveys to Evaluate Fish Distribution Models for the Upper Missouri River Basin Aquatic GAP Project

Steve E. Freeling 1, Charles R. Berry, Jr. 2, Ryan M. Sylvester 1, Steven S. Wall 1, and Jonathan A. Jenks 1

1Department of Wildlife and Fisheries Sciences, South Dakota State University, Brookings

2U.S. Geological Survey, South Dakota Cooperative Fish and Wildlife Research Unit, South Dakota State University, Brookings

Introduction

For terrestrial vertebrates, the Gap Analysis Program has generated what Scott et al. (1993) called “the necessary ingredients for anticipation of endangerment of species with the ultimate goal of predicting areas of high biodiversity.” The necessary ingredients include maps of land cover, terrestrial vertebrate distributions, and land stewardship. With the aquatic component of Gap Analysis, analyses are done within watershed boundaries using valley segments as the finest resolution (Wall et al. 2004). We report here on surveys used to evaluate fish species distribution models for the aquatic GAP project of the huge Missouri River Basin.

The longest river in North America, the Missouri flows through the northern Great Plains for 3,768 km to its confluence with the Mississippi River. The river has been greatly altered in the past century for flood protection, navigation, irrigation, and power production. Twenty-five families, containing 136 species, compose its ichthyofauna. Populations of 24 species are known to be declining. Eleven fishes are listed as imperiled by two or more of the seven main-stem states (Galat et al. 2004). Plans for conserving these species and areas of high species diversity might be assisted by the Gap Analysis data provided by our project.

The Missouri River Gap Analysis Project is a partnership between South Dakota State University, working in the upper basin, the Missouri Resource Assessment Program, working in the lower basin, and the U.S. Geological Survey. Models are being developed to predict the distribution of fish species. Our purpose is to report on the initial fieldwork done in the upper basin to test the accuracy of the fish distribution models.

Site Selection

One watershed was selected from each U.S. state and one Canadian province in the upper Missouri River basin. We met with each state and provincial game and fish agency to inform them about the GAP program and select watersheds for sampling. We tended to choose watersheds that lacked fish community data and were the right size for our planned effort. The selected watersheds (Figure 1) were the Beaver River ( North Dakota), Elm River ( North Dakota and South Dakota), Frenchman River ( Saskatchewan and Montana), Nowood River ( Wyoming), and Sweetgrass River ( Montana).

Watersheds in the Upper Missouri River Basin

Figure 1. Five watersheds sampled (black polygons) in the Upper Missouri River Basin (gray polygon).

Streams in each watershed were stratified into three stream types: headwaters, creeks, and small rivers, which were determined from the shreve order (Shreve 1967). Shreve orders were < 9 for headwaters, 10-75 for creeks, and 76-1500 for small rivers (Wall et al. 2004). Eight general sites were selected for each stream type in each watershed, with the goal of sampling six reaches in each of the three stream types. A reach was a stream segment approximately 39 times the mean stream width (Patton et al. 2000) (50 to 200 m) and included at least one riffle, pool, and run. Our goal of sampling 18 reaches was not met in three watersheds (Table 1) for a variety of reasons, including few tributaries to choose from, lack of access permission, and lack of flow.

Table 1. Number of sample reaches for each stream type (headwater, creek, and small river) for five selected watersheds in the Upper Missouri River Basin.

Watershed

Headwater

Creek

SmallRiver

Nowood

6

6

6

Frenchman

5

7

6

Sweetgrass

1

3

5

Beaver

 

1

6

Elm

   

6

Fish Sampling

Fish were collected with a battery-powered electrofisher (Smith-Root model LR-24) and a bag seine (9.1 m x 1.2 m with 5-mm delta mesh). The electrofisher was inefficient in wide streams, in deep pools, or in turbid water, thus seining was also used. Sampling started at the downstream end of a reach and progressed upstream in a zigzag pattern; no block nets were used (Simonson and Lyons 1995). Fish were held in 11.4-L plastic pails before being identified to species, counted, and released at the downstream end of the reach. Seining was done after electrofishing was completed.

Ancillary studies were planned to augment the basic project to access GAP fish distribution models. Habitat measurements included water chemistry, channel morphology, and riparian vegetation. These data may be valuable in future fisheries studies. Macroinvertebrates were collected with 15 sweeps from a D-frame dip net and three sediment core samples. These data are some of the first collected in these watersheds. White sucker were collected to determine population metrics. White suckers were chosen because of their occurrence in all watersheds, thus leading to the possibility of analysis of growth over a large spatial scale.

Results

A total of 41 species were identified among the 19,556 fish collected in the five watersheds. Fathead minnow and white sucker were most abundant (50% of all fish sampled) and were found in all five watersheds (Table 2). The Beaver River watershed had the highest species richness (21 species) and contained six species not found elsewhere (i.e., emerald shiner, red shiner, white bass, spottail shiner, yellow perch, and gizzard shad). The first three species inhabit open channels of large, permanently flowing rivers with low gradient (Pflieger 1997). The high species richness and presence of unique species probably occurred because this was the only direct tributary to the Missouri River. Northern redbelly dace, a cool water species (Brown 1971), were recorded for the first time in ten years in the Beaver watershed. The Elm River contained 17 species and had the greatest number of fish per site (971). Three lentic predatory fish (bluegill, black crappie, and largemouth bass) were only found in the Elm watershed. The presence of these lentic species may be due to stocking in the numerous impoundments in the watershed and also may have localized effects on riverine species richness and abundance.

Table 2. Fish species richness and abundance in five watersheds of the Upper Missouri River Basin.

Species

Beaver

Elmm

Frenchman

Nowood

Sweetgrass

Red shiner Cyprinella lutrensis

111

       

Emerald shiner Notropis atherinoides

84

       

Yellow perch Perca flavescens

6

       

White bass Morone chrysops

2

       

Spottail shiner Notropis hudsonius

2

       

Gizzard shad Dorosoma cepedianum

1

       

Black bullhead Ameiurus melas

888

241

     

Sand shiner Notropis ludibundus

198

813

     

Orangespotted sunfish Lepomis humilis

66

667

     

Johnny darter Etheostoma nigrum

37

120

     

Channel catfish Ictalurus punctatus

5

11

     

Bluegill Lepomis macrochirus

 

2

     

Bigmouth buffalo Ictiobus cyprinellus

 

3

     

Black crappie Pomoxis nigromaculatus

 

5

     

River carpsucker Carpiodes carpio

 

8

     

Green sunfish Lepomis cyanellus

 

25

     

Largemouth bass Micropterus salmoides

 

26

     

Creek chub Semotilus atromaculatus

 

48

     

Northern pike Esox lucius

12

 

3

   

Brassy minnow Hybognathus hankinsoni

11

 

27

   

Northern redbelly dace Phoxinus eos

12

 

53

   

Iowa darter Etheostoma exile

58

15

38

   

Walleye Stizostedion vitreum

 

1

1

   

Common carp Cyprinus carpio

330

157

11

59

 

Fathead minnow Pimephales promelas

328

3657

4314

29

15

White sucker Catostomus commersoni

83

28

592

201

92

Brook stickleback Culaea inconstans

33

 

254

 

10

Stonecat Noturus flavus

19

 

3

19

13

Shorthead redhorse Moxostoma macrolepidotum macrolepidotum macrolepidotum

10

 

6

5

2

Plains minnow Hybognathus placitus

   

8

   

Pearl dace Margariscus margarita

   

333

   

Hybognathus spp.

   

1887

   

Flathead chub Platygobio gracilis

   

186

19

 

Mountain sucker Catostomus platyrhynchus

   

30

74

103

Brook trout Salvelinus fontinalis

   

67

53

85

Lake chub Couesius plumbeus

   

605

13

113

Longnose dace Rhinichthys cataractae

   

681

681

276

Rainbow trout Oncorhynchus mykiss

     

60

 

Longnose sucker Catostomus catostomus

     

28

3

Brown trout Salmo trutta

     

336

30

Mountain whitefish Prosopium williamsoni

       

4

Mottled sculpin Cottus bairdi

       

11

Totals

2296

5827

9099

1577

757

The Frenchman River watershed contained two unique species (plains minnow and pearl dace). This is the first documented occurrence of the plains minnow in Canada. The Nowood River and Sweetgrass River watersheds had very similar species assemblages with 11 of the same species, mainly trout and sucker species (Table 2); this is because both are cold-water, mountainous watersheds. Fish data and habitat measurements have been provided to the state or provincial agencies for use in their future management decisions and reports.

Future Plans

Fish habitat models are being developed using Chi-squared Automatic Interaction Detector (CHAID; SPSS 2001), which is a decision tree derived from algorithms. The Lower Missouri River Aquatic GAP project team is using similar methods. Accuracy will be assessed using data splitting, jackknifing, resubstitution, and an independent data set (Fielding and Bell 1997). Cohen’s Kappa will be used to assess chance corrected accuracy of the model (Titus et al. 1984). Macroinvertebrate assemblage will be used to determine if relationships exist between fish presence and macroinvertebrate presence (Lammert and Allan 1999). Macroinvertebrate assemblage may also be used in the discussion of commission and omission errors in the model.

In summary, the Missouri River Aquatic GAP Project is on schedule. The fieldwork has added information to fisheries databases managed by states and the province of Saskatchewan. Our experiences will be useful for Aquatic GAP projects that follow.

Literature Cited

Brown, C.D. 1971. Fishes of Montana. Big Sky Books, Bozeman, Montana. 207 pp.

Fielding, A.H., and J.F. Bell. 1997. A review of methods for the assessment of prediction errors in conservation presence/absence models. Environmental Conservation 24:38-49.

Galat, D., C. Berry, W. Gardner, J. Hendrickson, G. Mestl, G. Power, C. Stone, and M. Winston. 2004. Spatiotemporal patterns and changes in Missouri River fishes. In J. Rine, R. Hughes, and R. Calamusso, editors. Historical changes in fish assemblages of large American Rivers. American Fisheries Society Symposium.

Lammert, M., and J.D. Allan. 1999. Assessing biotic integrity of streams: Effects of scale in measuring the influence of land use/cover and habitat structure on fish and macroinvertebrates. Environmental Management 23:257-270.

Patton, T.M., W.A. Hubert, F.J. Rahel, and K.G. Gerow. 2000. Effort needed to estimate species richness in small streams on the Great Plains in Wyoming. North American Journal of Fisheries Management 20:394-398.

Pflieger, W.L. 1997. The Fishes of Missouri. Conservation Commission of the State of Missouri, Jefferson City, Missouri. 372 pp.

Scott, J.M., F. Davis, B. Csuti, R. Noss, B. Butterfield, C. Groves, H. Anderson, S. Caicco, F. D’Erchia, T.C. Edwards, Jr., J. Ulliman, and R.G. Wright. 1993. Gap Analysis: A geographic approach to protection of biological diversity. Wildlife Monographs 123:1-41.

Shreve, R.L. 1967. Infinite topologically random channel networks. Journal of Geology 75:178-186.

Simonson, T.D., and J. Lyons. 1995. Comparison of catch per effort and removal procedures for sampling stream fish assemblages. North American Journal of Fisheries Management 15:419-427.

SPSS Inc. 2001. AnswerTree 3.0 User’s Guide. SPSS Inc., Chicago, Illinois. 226 pp.

Titus, K., J.A. Mosher, and B.K. Williams. 1984. Chance-corrected classification for use in discriminant analysis: Ecological applications. The American Midland Naturalist 111:1-7.

Wall, S.S., C.R. Berry, Jr., C.M. Blausey, J.A. Jenks, and C.J. Kopplin. 2004. Fish-habitat modeling for gap analysis to conserve the endangered Topeka shiner (Notropis topeka). Canadian Journal of Fisheries and Aquatic Sciences 61:954-973.

Return to Table of Contents